BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H03SP1|AL425193
(314 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 568 e-162
>3x_Contig1493
Length = 12243
Score = 568 bits (284), Expect = e-162
Identities = 305/314 (97%)
Strand = Plus / Minus
Query: 1 gttagtgattmatgctgaatttgtatgtggtgagtgggtgtttcgttcggggtgtttttg 60
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9025 gttagtgattcatgctgactttgtatgtggtgagtgggtgtttcgttcggggtgtttttg 8966
Query: 61 ccacctattgcgttcgtcatattttcaagcacaccccacaaatcggtttgcaaaaacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8965 ccacctattgcgttcgtcatattttcaagcacaccccacaaatcggtttgcaaaaacccc 8906
Query: 121 tttttctaaatggtcagtcgttttttttgtttctattttcttccatttttacaatcggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8905 tttttctaaatggtcagtcgttttttttgtttctattttcttccatttttacaatcggat 8846
Query: 181 mtgggagtaggaacaacggaatagaaccacagtgtcaacaggttcaatgtcattttttca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8845 ctgggagtaggaacaacggaatagaaccacagtgtcaacaggttcaatgtcattttttca 8786
Query: 241 agtmatttttctacgttaagccgttgttatccttttcaaagtacgagtmcggggtgggct 300
||| |||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 8785 agtcatttttctacgttaagccgttgttatccttttcaaagtacgaagtccgggtggcct 8726
Query: 301 ttatgccaaattat 314
||||||||||||||
Sbjct: 8725 ttatgccaaattat 8712
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2471
Number of Sequences: 1807
Number of extensions: 2471
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 314
length of database: 10,358,551
effective HSP length: 15
effective length of query: 299
effective length of database: 10,331,446
effective search space: 3089102354
effective search space used: 3089102354
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.5 bits)